A Muslim in Indonesia is vastly different from a Muslim in Afghanistan. Remember, Islam is a culture as much as it is a religion. Where they seem to be similar is a strict adherence to social order, even if that order is 8th century stuff. Afghanistan is always going to have warlords that control areas. That's the way it has been for eons.
The interesting thing will be what will happen when the Chinese try to take over. It is, after all, their turn to smack the tar baby.